What does UCSF Chimera stand for?
What does UCSF Chimera stand for?
interactive visualization and analysis of molecular
UCSF Chimera (or simply Chimera) is an extensible program for interactive visualization and analysis of molecular structures and related data, including density maps, supramolecular assemblies, sequence alignments, docking results, trajectories, and conformational ensembles.
What is Chimera in bioinformatics?
In genetics and molecular biology, a chimera is a single DNA sequence originating from multiple transcripts or parent sequences. Chimeras are generally considered a contaminant, as a chimera can be interpreted as a novel sequence while it is in fact an artifact.
How do I install UCSF Chimera?
Chimera is a volumetric visualization package developed at UCSF. The download page is here….
- Download the binary.
- Change the installation binary into an executable with chmod +x chimera-installer. bin.
- ./installer. bin.
- If you’re not installing it as root, use a local directory to install to, e.g., /home/zing/local/chimera.
Which is better PyMOL or chimera?
Chimera is easier to use than PyMOL to do sophisticated structure analyses, so it would be more appropriate for an advanced course protein structure analysis.
Is UCSF Chimera free?
UCSF Chimera is a program for the interactive visualization and analysis of molecular structures and related data, including density maps, trajectories, and sequence alignments. It is available free of charge for noncommercial use.
Is the chimera female?
Chimera, in Greek mythology, a fire-breathing female monster resembling a lion in the forepart, a goat in the middle, and a dragon behind. She devastated Caria and Lycia until she was slain by Bellerophon.
Where does chimera live?
|Typhoeus and Echidna
|Lion’s body, three-heads–of a lion, goat and serpent
|Mount Cragus in Lycia
Is PyMOL useful?
In spite of this difficulty, PyMOL is used widely in structural biology.1, 2 PyMOL is often used for molecular visualization by crystallographic, molecular dynamics simulation, and protein modeling software packages.3, 4, 5, 6, 7, 8, 9, 10, 11 PyMOL provides exquisite control of the display of images.
Why is PyMOL good?
PyMOL. PyMOL is a great program for looking at molecular structures and making publication quality pictures or movies. Although PyMOL can be run entirely from scripts, the presence of this GUI places PyMOL head and shoulders above previous picture-making programs such as Molscript or Bobscript.
What is the Chimera program at UCSF?
UCSF Chimera. UCSF Chimera (or simply Chimera) is an extensible program for interactive visualization and analysis of molecular structures and related data, including density maps, supramolecular assemblies, sequence alignments, docking results, trajectories, and conformational ensembles. High-quality images and movies can be created.
What is the source of the Chimera program?
Chimera is developed by the Resource for Biocomputing, Visualization, and Informatics (RBVI) at the University of California, San Francisco. Development is partially supported by the National Institutes of Health (NIGMS grant P41-GM103311). The next-generation program is UCSF ChimeraX.
What is a chimera in mythology?
Chimera, chimaera, or chimaira may refer to: Chimera (mythology), a monstrous creature with parts from multiple animals. Mount Chimaera, the region in Lycia that some believe was an inspiration for the myth.
What is the main window and sequence window of Chimera?
Chimera main window (FSH and receptor, 1xwd) and sequence window (alignment of FSH receptors from different species).